VesselVio is an open-source application designed for the analysis and visualization of segmented vasculature datasets.
To analyze or visualize your binarized vasculature or graph datasets, simply load them into the application, define your analysis settings, and click ‘Analyze’ or ‘Visualize’.
Currently, VesselVio is available for download as a standalone application for computers running Windows 10 and MacOS 11.6+.
Of course, if you use VesselVio in your research, don’t forget to cite our publication in Cell Reports Methods.
It’s important to remember that the application was built for the analysis of segmented vasculature datasets. If you’re looking for resources to segment your datasets, you can check out ClearMap, VesSAP, or DeepVesselNet. Of course, there are many more options available.
If you’re looking for help with annotating your whole-brain vasculature datasets, we’d recommend that you check out QuickNII as a starting point.